Transcript: ENST00000528338.1 TPH1-004

Description

tryptophan hydroxylase 1 [Source:HGNC Symbol;Acc:12008]

Gene Synonyms

TPH, TPRH, TRPH

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 5014 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250018.2	TPH1-001	5325	444aa	ENSP00000250018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7829	B3VRW5 B3VRX0 B3VRX5 B3VRY0 B3VRY5 B3VRZ0 B3VRZ5 B3VS00 B3VS05 B3VS10 P17752	NM_004179.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341556.2	TPH1-201	1427	466aa	ENSP00000343550.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRW5 B3VRX0 B3VRX5 B3VRY0 B3VRY5 B3VRZ5 B3VS00 B3VS05 B3VS10 P17752	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528338.1	TPH1-004	556	165aa	ENSP00000436081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRX5 B3VRY0 B3VRY5 E9PR49	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417164.1	TPH1-002	1138	206aa	ENSP00000403831.1	Nonsense mediated decay		B3VRX0 B3VRX5 B3VRY0 B3VRY5 E7EMX4	-	-
ENST00000525406.1	TPH1-003	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 556 bps, Translation length: 165 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000528338.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389699 (version 1)