Transcript: ENST00000250018.2 TPH1-001

Description

tryptophan hydroxylase 1 [Source:HGNC Symbol;Acc:12008]

Gene Synonyms

TPH, TPRH, TRPH

Location

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 9380 variant alleles and maps to 594 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250018.2	TPH1-001	5325	444aa	ENSP00000250018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7829	B3VRW5 B3VRX0 B3VRX5 B3VRY0 B3VRY5 B3VRZ0 B3VRZ5 B3VS00 B3VS05 B3VS10 P17752	NM_004179.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341556.2	TPH1-201	1427	466aa	ENSP00000343550.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRW5 B3VRX0 B3VRX5 B3VRY0 B3VRY5 B3VRZ5 B3VS00 B3VS05 B3VS10 P17752	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528338.1	TPH1-004	556	165aa	ENSP00000436081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRX5 B3VRY0 B3VRY5 E9PR49	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417164.1	TPH1-002	1138	206aa	ENSP00000403831.1	Nonsense mediated decay		B3VRX0 B3VRX5 B3VRY0 B3VRY5 E7EMX4	-	-
ENST00000525406.1	TPH1-003	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,325 bps, Translation length: 444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17752

CCDS

This transcript is a member of the Human CCDS set: CCDS7829

Version

ENST00000250018.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389696 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.