Transcript: ABCB6-005 ENST00000295750.4

Description

ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:HGNC Symbol;Acc:47]

Gene Synonyms

ABC, ABC14, DUH3, EST45597, LAN, MCOPCB7, MTABC3, PRP, UMAT, umat

Location

Chromosome 2: 220,074,494-220,083,076 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 21 domains and features, is associated with 3237 variant alleles and maps to 521 oligo probes.

Gene

This transcript is a product of gene ENSG00000115657.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ABCB6-001	ENST00000265316.3	3016	842aa	ENSP00000265316.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2436	H7C1R6 Q9NP58 U3THN0	NM_005689 NP_005680	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ABCB6-201	ENST00000439002.2	2834	796aa	ENSP00000394333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q9NP58 U3THN0	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ABCB6-005	ENST00000295750.4	2238	690aa	ENSP00000295750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-015	ENST00000448398.1	882	119aa	ENSP00000404006.1	Nonsense mediated decay	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-003	ENST00000417678.1	793	147aa	ENSP00000392988.1	Nonsense mediated decay	-	H7C1R6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-012	ENST00000443805.1	679	40aa	ENSP00000414646.1	Nonsense mediated decay	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-007	ENST00000452545.1	544	68aa	ENSP00000401811.1	Nonsense mediated decay	-	H7C1R6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-006	ENST00000497882.1	3008	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-013	ENST00000485773.1	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-011	ENST00000492543.1	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-014	ENST00000487380.1	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-009	ENST00000496984.1	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-008	ENST00000492953.1	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-010	ENST00000494639.1	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,238 bps, Translation length: 690 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000295750.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336021 (version 2)

Favourite species

All species

Recent locations

Transcript: ABCB6-005 ENST00000295750.4

Summary

Transcript-based displays