Transcript: ABCB6-006 ENST00000497882.1

Description

ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:HGNC Symbol;Acc:47]

Gene Synonyms

ABC, ABC14, DUH3, EST45597, LAN, MCOPCB7, MTABC3, PRP, UMAT, umat

Location

Chromosome 2: 220,074,494-220,080,607 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 2431 variant alleles and maps to 481 oligo probes.

Gene

This transcript is a product of gene ENSG00000115657.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ABCB6-001	ENST00000265316.3	3016	842aa	ENSP00000265316.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2436	H7C1R6 Q9NP58 U3THN0	NM_005689 NP_005680	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ABCB6-201	ENST00000439002.2	2834	796aa	ENSP00000394333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q9NP58 U3THN0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ABCB6-005	ENST00000295750.4	2238	690aa	ENSP00000295750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-015	ENST00000448398.1	882	119aa	ENSP00000404006.1	Nonsense mediated decay	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-003	ENST00000417678.1	793	147aa	ENSP00000392988.1	Nonsense mediated decay	-	H7C1R6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-012	ENST00000443805.1	679	40aa	ENSP00000414646.1	Nonsense mediated decay	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-007	ENST00000452545.1	544	68aa	ENSP00000401811.1	Nonsense mediated decay	-	H7C1R6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ABCB6-006	ENST00000497882.1	3008	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-013	ENST00000485773.1	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-011	ENST00000492543.1	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-014	ENST00000487380.1	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-009	ENST00000496984.1	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-008	ENST00000492953.1	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ABCB6-010	ENST00000494639.1	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 3,008 bps,

Version

ENST00000497882.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336022 (version 1)

Favourite species

All species

Recent locations

Transcript: ABCB6-006 ENST00000497882.1

Summary

Transcript-based displays