Transcript: ENST00000490971.1 PRKAG3-002

Description

protein kinase, AMP-activated, gamma 3 non-catalytic subunit [Source:HGNC Symbol;Acc:9387]

Gene Synonyms

AMPKG3

Location

Chromosome 2: 219,691,358-219,696,526 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 2803 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000115592.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439262.2	PRKAG3-202	2301	464aa	ENSP00000397133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70 Q9UGI9	NM_017431.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529249.1	PRKAG3-006	2222	489aa	ENSP00000436068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2424	B4DT70 Q9UGI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545803.1	PRKAG3-203	1784	305aa	ENSP00000444536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392098.3	PRKAG3-201	1193	353aa	ENSP00000375947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DUK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430489.1	PRKAG3-005	331	100aa	ENSP00000416100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000233944.3	PRKAG3-001	2326	489aa	ENSP00000233944.3	Nonsense mediated decay	CCDS2424	B4DT70 Q9UGI9	-	-
ENST00000470307.2	PRKAG3-003	1199	353aa	ENSP00000419272.2	Nonsense mediated decay		B4DUK8	-	-
ENST00000490971.1	PRKAG3-002	1619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,619 bps,

Version

ENST00000490971.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336553 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000490971.1 PRKAG3-002

Summary