Transcript: ENST00000233944.3 PRKAG3-001

Description

protein kinase, AMP-activated, gamma 3 non-catalytic subunit [Source:HGNC Symbol;Acc:9387]

Gene Synonyms

AMPKG3

Location

Chromosome 2: 219,687,106-219,696,539 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 4677 variant alleles and maps to 518 oligo probes.

Gene

This transcript is a product of gene ENSG00000115592.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439262.2	PRKAG3-202	2301	464aa	ENSP00000397133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70 Q9UGI9	NM_017431.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529249.1	PRKAG3-006	2222	489aa	ENSP00000436068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2424	B4DT70 Q9UGI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545803.1	PRKAG3-203	1784	305aa	ENSP00000444536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392098.3	PRKAG3-201	1193	353aa	ENSP00000375947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DUK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430489.1	PRKAG3-005	331	100aa	ENSP00000416100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000233944.3	PRKAG3-001	2326	489aa	ENSP00000233944.3	Nonsense mediated decay	CCDS2424	B4DT70 Q9UGI9	-	-
ENST00000470307.2	PRKAG3-003	1199	353aa	ENSP00000419272.2	Nonsense mediated decay		B4DUK8	-	-
ENST00000490971.1	PRKAG3-002	1619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,326 bps, Translation length: 489 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGI9

CCDS

This transcript is a member of the Human CCDS set: CCDS2424

Version

ENST00000233944.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256722 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000233944.3 PRKAG3-001

Summary