Transcript: ENST00000578299.1 PTP4A1-005

Description

protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634]

Gene Synonyms

HH72, PRL-1, PRL1, PTP(CAAX1), PTPCAAX1

Location

About this transcript

This transcript has 2 exons, is associated with 1984 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370651.3	PTP4A1-004	5088	173aa	ENSP00000359685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4965	Q93096	NM_003463.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370650.2	PTP4A1-201	3294	148aa	ENSP00000359684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578299.1	PTP4A1-005	135	44aa	ENSP00000462406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473334.1	PTP4A1-003	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470661.1	PTP4A1-002	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 135 bps, Translation length: 44 residues

Version

ENST00000578299.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446588 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.