Transcript: ENST00000535092.1 RFC5-008

Description

replication factor C (activator 1) 5, 36.5kDa [Source:HGNC Symbol;Acc:9973]

Gene Synonyms

RFC36

Location

Chromosome 12: 118,454,534-118,457,559 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 1240 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000111445.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392542.2	RFC5-001	2442	319aa	ENSP00000376325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41843	C9JH72 E9PEP3 F5H304 F5H5S0 F8W9B4 P40937	NM_181578.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229043.3	RFC5-201	2229	255aa	ENSP00000229043.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEP3 F5H5S0 F8W9B4	NM_001130112.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454402.2	RFC5-002	1655	340aa	ENSP00000408295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9185	E9PEP3 F5H5S0 F8W9B4 P40937	NM_007370.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537315.1	RFC5-003	820	104aa	ENSP00000443187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEP3 F5H5S0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484086.2	RFC5-007	631	139aa	ENSP00000445917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0U6 F5H304	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535092.1	RFC5-008	574	63aa	ENSP00000438252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H304	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449641.2	RFC5-006	572	99aa	ENSP00000393636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEP3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420967.1	RFC5-004	559	104aa	ENSP00000390340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JH72 F5H304	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543153.1	RFC5-009	1061	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472603.1	RFC5-005	681	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 574 bps, Translation length: 63 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000535092.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401561 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000535092.1 RFC5-008

Summary