Transcript: ENST00000477854.1 PTPN5-004

Description

protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) [Source:HGNC Symbol;Acc:9657]

Gene Synonyms

PTPSTEP, STEP

Location

Chromosome 11: 18,749,475-18,765,389 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 7018 variant alleles and maps to 542 oligo probes.

Gene

This transcript is a product of gene ENSG00000110786.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396170.1	PTPN5-002	3871	533aa	ENSP00000379473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41626	E9PLZ4 P54829 Q86TL3	NM_001278236.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358540.2	PTPN5-001	3135	565aa	ENSP00000351342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7845	B7ZAF5 E9PLZ4 P54829 Q86TL3	NM_006906.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396171.4	PTPN5-202	3088	565aa	ENSP00000379474.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7845	B7ZAF5 E9PLZ4 P54829 Q86TL3	NM_032781.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396167.2	PTPN5-201	3037	533aa	ENSP00000379470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41626	E9PLZ4 P54829 Q86TL3	NM_001278239.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477854.1	PTPN5-004	2826	369aa	ENSP00000435056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ4 Q86TL3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396168.1	PTPN5-006	2796	541aa	ENSP00000379471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60746	B7ZAF5 E9PLZ4 Q86TL3	NM_001278238.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396166.3	PTPN5-005	2299	171aa	ENSP00000379469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MXF1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496201.2	PTPN5-007	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,826 bps, Translation length: 369 residues

Version

ENST00000477854.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259228 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000477854.1 PTPN5-004

Summary