Transcript: ENST00000396166.3 PTPN5-005

Description

protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) [Source:HGNC Symbol;Acc:9657]

Gene Synonyms

PTPSTEP, STEP

Location

Chromosome 11: 18,749,477-18,752,291 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 1344 variant alleles and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSG00000110786.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396170.1	PTPN5-002	3871	533aa	ENSP00000379473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41626	E9PLZ4 P54829 Q86TL3	NM_001278236.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358540.2	PTPN5-001	3135	565aa	ENSP00000351342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7845	B7ZAF5 E9PLZ4 P54829 Q86TL3	NM_006906.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396171.4	PTPN5-202	3088	565aa	ENSP00000379474.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7845	B7ZAF5 E9PLZ4 P54829 Q86TL3	NM_032781.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396167.2	PTPN5-201	3037	533aa	ENSP00000379470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41626	E9PLZ4 P54829 Q86TL3	NM_001278239.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477854.1	PTPN5-004	2826	369aa	ENSP00000435056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ4 Q86TL3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396168.1	PTPN5-006	2796	541aa	ENSP00000379471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60746	B7ZAF5 E9PLZ4 Q86TL3	NM_001278238.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396166.3	PTPN5-005	2299	171aa	ENSP00000379469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MXF1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496201.2	PTPN5-007	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,299 bps, Translation length: 171 residues

Version

ENST00000396166.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259229 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000396166.3 PTPN5-005

Summary