Transcript: ENST00000356135.5 CHKA-002

Description

choline kinase alpha [Source:HGNC Symbol;Acc:1937]

Gene Synonyms

CHK, CK, CKI, EK

Location

Chromosome 11: 67,821,287-67,888,911 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 30296 variant alleles and maps to 348 oligo probes.

Gene

This transcript is a product of gene ENSG00000110721.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265689.4	CHKA-001	2530	457aa	ENSP00000265689.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8178	E9PM06 P35790	NM_001277.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356135.5	CHKA-002	1755	439aa	ENSP00000348454.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8179	P35790	NM_212469.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531341.1	CHKA-006	524	156aa	ENSP00000435032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525155.1	CHKA-007	1201	164aa	ENSP00000432631.1	Nonsense mediated decay		H0YD02	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533728.1	CHKA-008	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530730.1	CHKA-003	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528235.1	CHKA-004	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533910.1	CHKA-005	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,755 bps, Translation length: 439 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35790

CCDS

This transcript is a member of the Human CCDS set: CCDS8179

Version

ENST00000356135.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000394572 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000356135.5 CHKA-002

Summary