Transcript: ENST00000534230.1 SC5D-004

Description

sterol-C5-desaturase [Source:HGNC Symbol;Acc:10547]

Gene Synonyms

ERG3, S5DES, SC5DL

Location

Chromosome 11: 121,163,480-121,179,339 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 6506 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000109929.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264027.4	SC5D-001	2456	299aa	ENSP00000264027.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8435	O75845 Q6GTM5	NM_006918.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392789.2	SC5D-002	2258	299aa	ENSP00000376539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8435	O75845 Q6GTM5	NM_001024956.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534230.1	SC5D-004	1861	228aa	ENSP00000432550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527762.1	SC5D-007	589	177aa	ENSP00000436290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPW5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528991.1	SC5D-008	346	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524683.1	SC5D-003	2391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527183.1	SC5D-009	1524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534455.1	SC5D-006	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531140.1	SC5D-005	767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,861 bps, Translation length: 228 residues

Version

ENST00000534230.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387701 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000534230.1 SC5D-004

Summary