Transcript: ENST00000589371.1 PPP1R13L-009

Description

protein phosphatase 1, regulatory subunit 13 like [Source:HGNC Symbol;Acc:18838]

Gene Synonyms

IASPP, NKIP1, PPP1R13BL, RAI, RAI4

Location

Chromosome 19: 45,882,896-45,885,850 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 1393 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSG00000104881.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000418234.2	PPP1R13L-002	3118	828aa	ENSP00000403902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33050	K7EN03 K7EPP1 Q8WUF5	NM_001142502.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360957.5	PPP1R13L-001	3104	828aa	ENSP00000354218.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33050	K7EN03 K7EPP1 Q8WUF5	NM_006663.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591986.1	PPP1R13L-008	648	29aa	ENSP00000466939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593226.1	PPP1R13L-005	525	128aa	ENSP00000466730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EN03 K7EPP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592134.1	PPP1R13L-006	392	60aa	ENSP00000467471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589371.1	PPP1R13L-009	355	90aa	ENSP00000466555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EML6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587270.1	PPP1R13L-004	2512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585905.1	PPP1R13L-003	2176	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589858.1	PPP1R13L-007	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 355 bps, Translation length: 90 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000589371.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457583 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000589371.1 PPP1R13L-009

Summary