Transcript: ENST00000418234.2 PPP1R13L-002

Description

protein phosphatase 1, regulatory subunit 13 like [Source:HGNC Symbol;Acc:18838]

Gene Synonyms

IASPP, NKIP1, PPP1R13BL, RAI, RAI4

Location

Chromosome 19: 45,882,896-45,909,607 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 35 domains and features, is associated with 13922 variant alleles and maps to 410 oligo probes.

Gene

This transcript is a product of gene ENSG00000104881.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000418234.2	PPP1R13L-002	3118	828aa	ENSP00000403902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33050	K7EN03 K7EPP1 Q8WUF5	NM_001142502.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360957.5	PPP1R13L-001	3104	828aa	ENSP00000354218.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33050	K7EN03 K7EPP1 Q8WUF5	NM_006663.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591986.1	PPP1R13L-008	648	29aa	ENSP00000466939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593226.1	PPP1R13L-005	525	128aa	ENSP00000466730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EN03 K7EPP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592134.1	PPP1R13L-006	392	60aa	ENSP00000467471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589371.1	PPP1R13L-009	355	90aa	ENSP00000466555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EML6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587270.1	PPP1R13L-004	2512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585905.1	PPP1R13L-003	2176	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589858.1	PPP1R13L-007	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,118 bps, Translation length: 828 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WUF5

CCDS

This transcript is a member of the Human CCDS set: CCDS33050

Version

ENST00000418234.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457586 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000418234.2 PPP1R13L-002

Summary