Transcript: ENST00000558709.1 SCG3-003

Description

secretogranin III [Source:HGNC Symbol;Acc:13707]

Gene Synonyms

FLJ90833, SGIII

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 4815 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220478.3	SCG3-001	3310	468aa	ENSP00000220478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10142	H0YKC2 Q8WXD2	NM_013243.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542355.2	SCG3-002	2163	236aa	ENSP00000445205.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53947	H0YKC2 Q8WXD2	NM_001165257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558709.1	SCG3-003	896	57aa	ENSP00000452745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKC2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 896 bps, Translation length: 57 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000558709.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419216 (version 1)