Transcript: ENST00000220478.3 SCG3-001

Description

secretogranin III [Source:HGNC Symbol;Acc:13707]

Gene Synonyms

FLJ90833, SGIII

Location

About this transcript

This transcript has 12 exons, is annotated with 6 domains and features, is associated with 17376 variant alleles and maps to 506 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220478.3	SCG3-001	3310	468aa	ENSP00000220478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10142	H0YKC2 Q8WXD2	NM_013243.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542355.2	SCG3-002	2163	236aa	ENSP00000445205.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53947	H0YKC2 Q8WXD2	NM_001165257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558709.1	SCG3-003	896	57aa	ENSP00000452745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKC2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,310 bps, Translation length: 468 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WXD2

CCDS

This transcript is a member of the Human CCDS set: CCDS10142

Version

ENST00000220478.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254670 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.