Transcript: ENST00000562429.1 NFAT5-008

Description

nuclear factor of activated T-cells 5, tonicity-responsive [Source:HGNC Symbol;Acc:7774]

Gene Synonyms

KIAA0827, NF-AT5, NFATL1, NFATZ, OREBP, RP11-311C24.1, TONEBP

Location

Chromosome 16: 69,710,798-69,724,879 forward strand.

About this transcript

This transcript has 3 exons, is associated with 6223 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000102908.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349945.1	NFAT5-201	14219	1455aa	ENSP00000338806.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_138714.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432919.1	NFAT5-202	14157	1549aa	ENSP00000396538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45518	O94916	NM_138713.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354436.2	NFAT5-001	13229	1531aa	ENSP00000346420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10881	O94916	NM_006599.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393742.2	NFAT5-002	13067	1455aa	ENSP00000377343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_173214.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567239.1	NFAT5-009	6376	1548aa	ENSP00000457593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45519	O94916	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566899.1	NFAT5-006	4914	1455aa	ENSP00000455628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_173215.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565301.1	NFAT5-007	653	141aa	ENSP00000463214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKS5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426654.2	NFAT5-004	14219	99aa	ENSP00000413126.2	Nonsense mediated decay		F6X8W2	-	-
ENST00000567990.1	NFAT5-003	2855	119aa	ENSP00000455115.1	Nonsense mediated decay		H3BP21	-	-
ENST00000563474.2	NFAT5-011	732	143aa	ENSP00000462061.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568832.1	NFAT5-010	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562429.1	NFAT5-008	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 562 bps,

Version

ENST00000562429.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433977 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000562429.1 NFAT5-008

Summary