Transcript: ENST00000393742.2 NFAT5-002

Description

nuclear factor of activated T-cells 5, tonicity-responsive [Source:HGNC Symbol;Acc:7774]

Gene Synonyms

KIAA0827, NF-AT5, NFATL1, NFATZ, OREBP, RP11-311C24.1, TONEBP

Location

Chromosome 16: 69,600,111-69,738,569 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 27 domains and features, is associated with 58747 variant alleles and maps to 862 oligo probes.

Gene

This transcript is a product of gene ENSG00000102908.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349945.1	NFAT5-201	14219	1455aa	ENSP00000338806.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_138714.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432919.1	NFAT5-202	14157	1549aa	ENSP00000396538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45518	O94916	NM_138713.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354436.2	NFAT5-001	13229	1531aa	ENSP00000346420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10881	O94916	NM_006599.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393742.2	NFAT5-002	13067	1455aa	ENSP00000377343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_173214.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567239.1	NFAT5-009	6376	1548aa	ENSP00000457593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45519	O94916	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566899.1	NFAT5-006	4914	1455aa	ENSP00000455628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10882	O94916	NM_173215.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565301.1	NFAT5-007	653	141aa	ENSP00000463214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKS5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426654.2	NFAT5-004	14219	99aa	ENSP00000413126.2	Nonsense mediated decay		F6X8W2	-	-
ENST00000567990.1	NFAT5-003	2855	119aa	ENSP00000455115.1	Nonsense mediated decay		H3BP21	-	-
ENST00000563474.2	NFAT5-011	732	143aa	ENSP00000462061.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568832.1	NFAT5-010	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562429.1	NFAT5-008	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 11, Transcript length: 13,067 bps, Translation length: 1,455 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94916

CCDS

This transcript is a member of the Human CCDS set: CCDS10882

Version

ENST00000393742.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268953 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000393742.2 NFAT5-002

Summary