Transcript: ENST00000561303.1 PIGH-008

Description

phosphatidylinositol glycan anchor biosynthesis, class H [Source:HGNC Symbol;Acc:8964]

Gene Synonyms

GPI-H

Location

Chromosome 14: 68,056,829-68,066,963 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4319 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000100564.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216452.4	PIGH-001	1420	188aa	ENSP00000216452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9784	Q14442	NM_004569.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559581.1	PIGH-006	1049	183aa	ENSP00000453733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560722.1	PIGH-010	903	187aa	ENSP00000453394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558987.1	PIGH-004	841	136aa	ENSP00000452816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561272.1	PIGH-012	760	182aa	ENSP00000453759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558493.1	PIGH-009	499	137aa	ENSP00000453158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559415.1	PIGH-003	476	137aa	ENSP00000452996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558001.1	PIGH-005	594	83aa	ENSP00000454061.1	Nonsense mediated decay		H0YNL7	-	-
ENST00000561303.1	PIGH-008	593	133aa	ENSP00000452974.1	Nonsense mediated decay		B4DEE2	-	-
ENST00000558198.1	PIGH-007	583	83aa	ENSP00000452924.1	Nonsense mediated decay		H0YNL7	-	-
ENST00000559097.1	PIGH-002	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559118.1	PIGH-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 593 bps, Translation length: 133 residues

Version

ENST00000561303.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417016 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000561303.1 PIGH-008

Summary