Transcript: ENST00000216452.4 PIGH-001

Description

phosphatidylinositol glycan anchor biosynthesis, class H [Source:HGNC Symbol;Acc:8964]

Gene Synonyms

GPI-H

Location

Chromosome 14: 68,056,028-68,067,004 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4679 variant alleles and maps to 317 oligo probes.

Gene

This transcript is a product of gene ENSG00000100564.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216452.4	PIGH-001	1420	188aa	ENSP00000216452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9784	Q14442	NM_004569.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559581.1	PIGH-006	1049	183aa	ENSP00000453733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560722.1	PIGH-010	903	187aa	ENSP00000453394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558987.1	PIGH-004	841	136aa	ENSP00000452816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561272.1	PIGH-012	760	182aa	ENSP00000453759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558493.1	PIGH-009	499	137aa	ENSP00000453158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559415.1	PIGH-003	476	137aa	ENSP00000452996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558001.1	PIGH-005	594	83aa	ENSP00000454061.1	Nonsense mediated decay		H0YNL7	-	-
ENST00000561303.1	PIGH-008	593	133aa	ENSP00000452974.1	Nonsense mediated decay		B4DEE2	-	-
ENST00000558198.1	PIGH-007	583	83aa	ENSP00000452924.1	Nonsense mediated decay		H0YNL7	-	-
ENST00000559097.1	PIGH-002	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559118.1	PIGH-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,420 bps, Translation length: 188 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14442

CCDS

This transcript is a member of the Human CCDS set: CCDS9784

Version

ENST00000216452.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000415189 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000216452.4 PIGH-001

Summary