Transcript: ENST00000465287.1 PATZ1-005

Description

POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071]

Gene Synonyms

MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23

Location

Chromosome 22: 31,736,663-31,739,577 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1424 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000100105.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266269.5	PATZ1-001	3781	687aa	ENSP00000266269.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13894	Q9HBE1 Q9HD72	NM_014323.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405309.3	PATZ1-002	3711	537aa	ENSP00000384173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46691	Q9HBE1 Q9HD72	NM_032052.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351933.4	PATZ1-004	3638	641aa	ENSP00000337520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13895	Q9HBE1 Q9HD72	NM_032050.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000215919.3	PATZ1-003	2516	537aa	ENSP00000215919.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13896	Q9HBE1 Q9HD72	NM_032051.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465287.1	PATZ1-005	1702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494109.1	PATZ1-006	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,702 bps,

Version

ENST00000465287.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321936 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000465287.1 PATZ1-005

Summary