Transcript: ENST00000215919.3 PATZ1-003

Description

POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071]

Gene Synonyms

MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23

Location

Chromosome 22: 31,736,663-31,741,762 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 33 domains and features, is associated with 2718 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSG00000100105.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266269.5	PATZ1-001	3781	687aa	ENSP00000266269.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13894	Q9HBE1 Q9HD72	NM_014323.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405309.3	PATZ1-002	3711	537aa	ENSP00000384173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46691	Q9HBE1 Q9HD72	NM_032052.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351933.4	PATZ1-004	3638	641aa	ENSP00000337520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13895	Q9HBE1 Q9HD72	NM_032050.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000215919.3	PATZ1-003	2516	537aa	ENSP00000215919.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13896	Q9HBE1 Q9HD72	NM_032051.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465287.1	PATZ1-005	1702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494109.1	PATZ1-006	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,516 bps, Translation length: 537 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HBE1

CCDS

This transcript is a member of the Human CCDS set: CCDS13896

Version

ENST00000215919.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000321934 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000215919.3 PATZ1-003

Summary