Transcript: ENST00000460352.1 MMP11-009

Description

matrix metallopeptidase 11 (stromelysin 3) [Source:HGNC Symbol;Acc:7157]

Gene Synonyms

SL-3, ST3, STMY3

Location

Chromosome 22: 24,119,828-24,123,287 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1674 variant alleles and maps to 292 oligo probes.

Gene

This transcript is a product of gene ENSG00000099953.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215743.3	MMP11-001	2291	488aa	ENSP00000215743.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13816	F8WDI7 P24347	NM_005940.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437086.1	MMP11-002	2071	354aa	ENSP00000408070.1	Nonsense mediated decay		E9PED7	-	-
ENST00000434318.1	MMP11-004	1165	170aa	ENSP00000412107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428253.1	MMP11-008	537	113aa	ENSP00000409860.1	Nonsense mediated decay		F8WDI7	-	-
ENST00000477567.1	MMP11-005	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460352.1	MMP11-009	918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489582.1	MMP11-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488363.1	MMP11-012	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480185.1	MMP11-013	370	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465385.1	MMP11-003	3823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492464.1	MMP11-011	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465730.1	MMP11-007	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493132.1	MMP11-010	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 918 bps,

Version

ENST00000460352.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319899 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000460352.1 MMP11-009

Summary