Transcript: ENST00000215743.3 MMP11-001

Description

matrix metallopeptidase 11 (stromelysin 3) [Source:HGNC Symbol;Acc:7157]

Gene Synonyms

SL-3, ST3, STMY3

Location

Chromosome 22: 24,115,006-24,126,503 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 31 domains and features, is associated with 5207 variant alleles and maps to 502 oligo probes.

Gene

This transcript is a product of gene ENSG00000099953.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215743.3	MMP11-001	2291	488aa	ENSP00000215743.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13816	F8WDI7 P24347	NM_005940.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437086.1	MMP11-002	2071	354aa	ENSP00000408070.1	Nonsense mediated decay		E9PED7	-	-
ENST00000434318.1	MMP11-004	1165	170aa	ENSP00000412107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428253.1	MMP11-008	537	113aa	ENSP00000409860.1	Nonsense mediated decay		F8WDI7	-	-
ENST00000477567.1	MMP11-005	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460352.1	MMP11-009	918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489582.1	MMP11-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488363.1	MMP11-012	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480185.1	MMP11-013	370	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465385.1	MMP11-003	3823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492464.1	MMP11-011	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465730.1	MMP11-007	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493132.1	MMP11-010	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,291 bps, Translation length: 488 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P24347

CCDS

This transcript is a member of the Human CCDS set: CCDS13816

Version

ENST00000215743.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319891 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000215743.3 MMP11-001

Summary