Transcript: ENST00000541285.1 ALKBH5-003

Description

alkB, alkylation repair homolog 5 (E. coli) [Source:HGNC Symbol;Acc:25996]

Gene Synonyms

ABH5, FLJ20308, OFOXD, OFOXD1

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 13532 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399138.4	ALKBH5-001	2748	394aa	ENSP00000382091.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42272	K7ER58 Q6P6C2	NM_017758.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541285.1	ALKBH5-003	1605	53aa	ENSP00000468116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490106.1	ALKBH5-002	2146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 1,605 bps, Translation length: 53 residues

Version

ENST00000541285.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400296 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.