Transcript: ENST00000491651.1 SMARCD3-008

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:11108]

Gene Synonyms

BAF60C, CRACD3, Rsc6p

Location

Chromosome 7: 150,939,807-150,974,982 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 15532 variant alleles and maps to 228 oligo probes.

Gene

This transcript is a product of gene ENSG00000082014.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392811.2	SMARCD3-001	2018	470aa	ENSP00000376558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5924	C9JYI7 Q6STE5	NM_003078.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262188.8	SMARCD3-002	1993	483aa	ENSP00000262188.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34780	Q6STE5	NM_001003801.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356800.2	SMARCD3-201	1669	470aa	ENSP00000349254.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5924	C9JYI7 Q6STE5	NM_001003802.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491651.1	SMARCD3-008	613	139aa	ENSP00000419886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469154.1	SMARCD3-004	2415	73aa	ENSP00000417908.1	Nonsense mediated decay		F8WBJ3	-	-
ENST00000485592.1	SMARCD3-011	820	68aa	ENSP00000417145.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477169.1	SMARCD3-009	802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460431.1	SMARCD3-010	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496530.1	SMARCD3-015	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489503.1	SMARCD3-013	378	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470588.1	SMARCD3-007	1755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472988.1	SMARCD3-005	1654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485610.1	SMARCD3-006	1480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472789.1	SMARCD3-014	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472103.1	SMARCD3-012	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 613 bps, Translation length: 139 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000491651.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348831 (version 7)

Favourite species

All species

Recent locations

Transcript: ENST00000491651.1 SMARCD3-008

Summary