Transcript: ENST00000564654.1 CNGB1-006

Description

cyclic nucleotide gated channel beta 1 [Source:HGNC Symbol;Acc:2151]

Gene Synonyms

CNCG2, CNCG3L, CNCG4, CNG4, CNGB1B, GAR1, GARP, GARP2, RCNC2, RCNCb, RCNCbeta, RP45

Location

Chromosome 16: 57,965,669-57,980,529 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 6654 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSG00000070729.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564448.1	CNGB1-003	4364	1245aa	ENSP00000454633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS67042	Q14028	NM_001286130.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251102.8	CNGB1-001	4179	1251aa	ENSP00000251102.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42169	H3BQC3 Q14028	NM_001297.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311183.4	CNGB1-002	1633	299aa	ENSP00000311670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45495	H3BQC3 Q14028	NM_001135639.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562761.1	CNGB1-004	709	214aa	ENSP00000455708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565942.1	CNGB1-008	378	126aa	ENSP00000455964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564654.1	CNGB1-006	875	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569643.1	CNGB1-009	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567568.1	CNGB1-005	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564450.1	CNGB1-007	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 875 bps,

Version

ENST00000564654.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432164 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000564654.1 CNGB1-006

Summary