Transcript: ENST00000251102.8 CNGB1-001

Description

cyclic nucleotide gated channel beta 1 [Source:HGNC Symbol;Acc:2151]

Gene Synonyms

CNCG2, CNCG3L, CNCG4, CNG4, CNGB1B, GAR1, GARP, GARP2, RCNC2, RCNCb, RCNCbeta, RP45

Location

Chromosome 16: 57,917,706-58,005,016 reverse strand.

About this transcript

This transcript has 33 exons, is annotated with 31 domains and features, is associated with 39392 variant alleles and maps to 829 oligo probes.

Gene

This transcript is a product of gene ENSG00000070729.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564448.1	CNGB1-003	4364	1245aa	ENSP00000454633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS67042	Q14028	NM_001286130.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251102.8	CNGB1-001	4179	1251aa	ENSP00000251102.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42169	H3BQC3 Q14028	NM_001297.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311183.4	CNGB1-002	1633	299aa	ENSP00000311670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45495	H3BQC3 Q14028	NM_001135639.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562761.1	CNGB1-004	709	214aa	ENSP00000455708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565942.1	CNGB1-008	378	126aa	ENSP00000455964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564654.1	CNGB1-006	875	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569643.1	CNGB1-009	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567568.1	CNGB1-005	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564450.1	CNGB1-007	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 33, Coding exons: 32, Transcript length: 4,179 bps, Translation length: 1,251 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14028

CCDS

This transcript is a member of the Human CCDS set: CCDS42169

Version

ENST00000251102.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000337167 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000251102.8 CNGB1-001

Summary