Transcript: ENST00000529608.1 TGFBR3-010

Description

transforming growth factor, beta receptor III [Source:HGNC Symbol;Acc:11774]

Gene Synonyms

BGCAN, betaglycan

Location

Chromosome 1: 92,185,450-92,193,475 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3212 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSG00000069702.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000212355.4	TGFBR3-201	6416	851aa	ENSP00000212355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30770	E9PAW7 Q03167	NM_003243.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370399.2	TGFBR3-001	4550	850aa	ENSP00000359426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55614	E9PAW7 Q03167	NM_001195684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525962.1	TGFBR3-006	3927	851aa	ENSP00000436127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30770	E9PAW7 Q03167	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465892.2	TGFBR3-002	2908	850aa	ENSP00000432638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55614	E9PAW7 Q03167	-	-
ENST00000417833.2	TGFBR3-009	551	35aa	ENSP00000395975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PAW7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533089.1	TGFBR3-007	5900	89aa	ENSP00000433477.1	Nonsense mediated decay		E9PAW7 E9PKY4	-	-
ENST00000532540.1	TGFBR3-008	3913	49aa	ENSP00000434994.1	Nonsense mediated decay		E9PMG7	-	-
ENST00000468996.2	TGFBR3-004	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533370.1	TGFBR3-003	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529608.1	TGFBR3-010	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470600.1	TGFBR3-005	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 785 bps,

Version

ENST00000529608.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382310 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000529608.1 TGFBR3-010

Summary