Transcript: ENST00000465892.2 TGFBR3-002

Description

transforming growth factor, beta receptor III [Source:HGNC Symbol;Acc:11774]

Gene Synonyms

BGCAN, betaglycan

Location

Chromosome 1: 92,149,286-92,351,666 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 15 domains and features, is associated with 81611 variant alleles and maps to 583 oligo probes.

Gene

This transcript is a product of gene ENSG00000069702.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000212355.4	TGFBR3-201	6416	851aa	ENSP00000212355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30770	E9PAW7 Q03167	NM_003243.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370399.2	TGFBR3-001	4550	850aa	ENSP00000359426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55614	E9PAW7 Q03167	NM_001195684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525962.1	TGFBR3-006	3927	851aa	ENSP00000436127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30770	E9PAW7 Q03167	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465892.2	TGFBR3-002	2908	850aa	ENSP00000432638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55614	E9PAW7 Q03167	-	-
ENST00000417833.2	TGFBR3-009	551	35aa	ENSP00000395975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PAW7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533089.1	TGFBR3-007	5900	89aa	ENSP00000433477.1	Nonsense mediated decay		E9PAW7 E9PKY4	-	-
ENST00000532540.1	TGFBR3-008	3913	49aa	ENSP00000434994.1	Nonsense mediated decay		E9PMG7	-	-
ENST00000468996.2	TGFBR3-004	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533370.1	TGFBR3-003	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529608.1	TGFBR3-010	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470600.1	TGFBR3-005	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,908 bps, Translation length: 850 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03167

CCDS

This transcript is a member of the Human CCDS set: CCDS55614

Version

ENST00000465892.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000027973 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000465892.2 TGFBR3-002

Summary