Transcript: ENST00000502849.1 SLC12A2-007

Description

solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:HGNC Symbol;Acc:10911]

Gene Synonyms

BSC, BSC2, NKCC1

Location

About this transcript

This transcript has 3 exons, is associated with 2052 variant alleles and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262461.2	SLC12A2-001	6885	1212aa	ENSP00000262461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4144	P55011 Q53ZR1	NM_001046.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343225.4	SLC12A2-004	5509	1196aa	ENSP00000340878.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58965	P55011	NM_001256461.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509205.1	SLC12A2-003	4263	1150aa	ENSP00000427109.1	Nonsense mediated decay		G3XAL9	-	-
ENST00000507791.1	SLC12A2-006	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504416.1	SLC12A2-002	3653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509616.1	SLC12A2-005	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502849.1	SLC12A2-007	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 489 bps,

Version

ENST00000502849.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372471 (version 1)