Transcript: ENST00000262461.2 SLC12A2-001

Description

solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:HGNC Symbol;Acc:10911]

Gene Synonyms

BSC, BSC2, NKCC1

Location

About this transcript

This transcript has 27 exons, is annotated with 31 domains and features, is associated with 46891 variant alleles and maps to 1052 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262461.2	SLC12A2-001	6885	1212aa	ENSP00000262461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4144	P55011 Q53ZR1	NM_001046.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343225.4	SLC12A2-004	5509	1196aa	ENSP00000340878.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58965	P55011	NM_001256461.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509205.1	SLC12A2-003	4263	1150aa	ENSP00000427109.1	Nonsense mediated decay		G3XAL9	-	-
ENST00000507791.1	SLC12A2-006	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504416.1	SLC12A2-002	3653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509616.1	SLC12A2-005	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502849.1	SLC12A2-007	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 6,885 bps, Translation length: 1,212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55011

CCDS

This transcript is a member of the Human CCDS set: CCDS4144

Version

ENST00000262461.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250972 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.