Transcript: ENST00000540632.2 SEZ6-003

Description

seizure related 6 homolog (mouse) [Source:HGNC Symbol;Acc:15955]

Location

Chromosome 17: 27,281,923-27,308,890 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 45 domains and features, is associated with 11734 variant alleles and maps to 555 oligo probes.

Gene

This transcript is a product of gene ENSG00000063015.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317338.12	SEZ6-002	4471	994aa	ENSP00000312942.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45639	K7ELJ4 Q53EL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360295.9	SEZ6-001	4306	993aa	ENSP00000353440.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45638	H0YF95 K7ELJ4 Q53EL9	NM_178860.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442608.3	SEZ6-012	3805	980aa	ENSP00000403784.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540632.2	SEZ6-003	3804	919aa	ENSP00000437650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YF95 K7ELJ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000335960.6	SEZ6-201	1721	508aa	ENSP00000337407.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFF1 K7ELJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535262.1	SEZ6-018	807	101aa	ENSP00000440216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539265.1	SEZ6-013	601	131aa	ENSP00000443589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585644.1	SEZ6-017	575	56aa	ENSP00000466107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540419.1	SEZ6-006	3468	454aa	ENSP00000440764.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544224.2	SEZ6-011	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,804 bps, Translation length: 919 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000540632.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448617 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000540632.2 SEZ6-003

Summary