Transcript: ENST00000539265.1 SEZ6-013

Description

seizure related 6 homolog (mouse) [Source:HGNC Symbol;Acc:15955]

Location

Chromosome 17: 27,287,258-27,287,991 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 385 variant alleles and maps to 72 oligo probes.

Gene

This transcript is a product of gene ENSG00000063015.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317338.12	SEZ6-002	4471	994aa	ENSP00000312942.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45639	K7ELJ4 Q53EL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360295.9	SEZ6-001	4306	993aa	ENSP00000353440.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45638	H0YF95 K7ELJ4 Q53EL9	NM_178860.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442608.3	SEZ6-012	3805	980aa	ENSP00000403784.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540632.2	SEZ6-003	3804	919aa	ENSP00000437650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YF95 K7ELJ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000335960.6	SEZ6-201	1721	508aa	ENSP00000337407.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFF1 K7ELJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535262.1	SEZ6-018	807	101aa	ENSP00000440216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539265.1	SEZ6-013	601	131aa	ENSP00000443589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585644.1	SEZ6-017	575	56aa	ENSP00000466107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540419.1	SEZ6-006	3468	454aa	ENSP00000440764.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544224.2	SEZ6-011	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 601 bps, Translation length: 131 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000539265.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397489 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000539265.1 SEZ6-013

Summary