Transcript: ENST00000583597.1 MRC2-003

Description

mannose receptor, C type 2 [Source:HGNC Symbol;Acc:16875]

Gene Synonyms

CD280, CLEC13E, ENDO180, KIAA0709, UPARAP

Location

Chromosome 17: 60,757,992-60,770,914 forward strand.

About this transcript

This transcript has 14 exons, is associated with 6119 variant alleles and maps to 516 oligo probes.

Gene

This transcript is a product of gene ENSG00000011028.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303375.5	MRC2-001	5988	1479aa	ENSP00000307513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11634	J3QQZ6 Q9UBG0	NM_006039.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446119.2	MRC2-004	3201	345aa	ENSP00000400445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EME3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579432.1	MRC2-005	574	35aa	ENSP00000463968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584682.1	MRC2-006	598	157aa	ENSP00000461968.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580916.1	MRC2-007	210	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583597.1	MRC2-003	3238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584265.1	MRC2-002	2025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 0, Transcript length: 3,238 bps,

Version

ENST00000583597.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445155 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000583597.1 MRC2-003

Summary