Transcript: ENST00000303375.5 MRC2-001

Description

mannose receptor, C type 2 [Source:HGNC Symbol;Acc:16875]

Gene Synonyms

CD280, CLEC13E, ENDO180, KIAA0709, UPARAP

Location

Chromosome 17: 60,704,762-60,770,958 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 64 domains and features, is associated with 30519 variant alleles and maps to 908 oligo probes.

Gene

This transcript is a product of gene ENSG00000011028.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303375.5	MRC2-001	5988	1479aa	ENSP00000307513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11634	J3QQZ6 Q9UBG0	NM_006039.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446119.2	MRC2-004	3201	345aa	ENSP00000400445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EME3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579432.1	MRC2-005	574	35aa	ENSP00000463968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584682.1	MRC2-006	598	157aa	ENSP00000461968.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580916.1	MRC2-007	210	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583597.1	MRC2-003	3238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584265.1	MRC2-002	2025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 5,988 bps, Translation length: 1,479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBG0

CCDS

This transcript is a member of the Human CCDS set: CCDS11634

Version

ENST00000303375.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000445152 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000303375.5 MRC2-001

Summary