Transcript: ENST00000394859.3 ANKRD13B-001

Description

ankyrin repeat domain 13B [Source:HGNC Symbol;Acc:26363]

Gene Synonyms

FLJ25555

Location

Chromosome 17: 27,920,486-27,941,779 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 10160 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSG00000198720.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394859.3	ANKRD13B-001	3214	626aa	ENSP00000378328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11251	K7ENT0 Q86YJ7	NM_152345.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583728.1	ANKRD13B-005	582	68aa	ENSP00000467078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579719.1	ANKRD13B-008	543	128aa	ENSP00000465708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488766.1	ANKRD13B-004	2671	626aa	ENSP00000431958.1	Nonsense mediated decay	CCDS11251	K7ENT0 Q86YJ7	-	-
ENST00000487527.1	ANKRD13B-002	3023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493506.1	ANKRD13B-003	2465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578943.1	ANKRD13B-006	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578811.1	ANKRD13B-007	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,214 bps, Translation length: 626 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YJ7

CCDS

This transcript is a member of the Human CCDS set: CCDS11251

Version

ENST00000394859.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256077 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394859.3 ANKRD13B-001

Summary