Transcript: ENST00000509471.1 ADH4-009

Description

alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:252]

Gene Synonyms

ADH-2

Location

Chromosome 4: 100,045,515-100,057,688 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4856 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000198099.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265512.7	ADH4-001	1993	380aa	ENSP00000265512.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34032	P08319	NM_000670.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508393.1	ADH4-002	2151	399aa	ENSP00000424630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423445.1	ADH4-201	1961	399aa	ENSP00000397939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505590.1	ADH4-005	1400	399aa	ENSP00000425416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512499.1	ADH4-011	946	257aa	ENSP00000423571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504125.1	ADH4-006	665	206aa	ENSP00000427525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506705.1	ADH4-004	1340	36aa	ENSP00000426667.1	Nonsense mediated decay		D6RF43	-	-
ENST00000509471.1	ADH4-009	575	115aa	ENSP00000424583.1	Nonsense mediated decay		H0Y9N0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504894.1	ADH4-003	489	36aa	ENSP00000427261.1	Nonsense mediated decay		D6RF43	-	-
ENST00000504581.1	ADH4-010	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503944.1	ADH4-007	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503416.1	ADH4-008	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 575 bps, Translation length: 115 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000509471.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364507 (version 1)

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Transcript: ENST00000509471.1 ADH4-009

Summary