Transcript: ENST00000504894.1 ADH4-003

Description

alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:252]

Gene Synonyms

ADH-2

Location

Chromosome 4: 100,060,294-100,065,448 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 2056 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000198099.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508393.1	ADH4-002	2151	399aa	ENSP00000424630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265512.7	ADH4-001	1993	380aa	ENSP00000265512.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34032	P08319	NM_000670.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423445.1	ADH4-201	1961	399aa	ENSP00000397939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505590.1	ADH4-005	1400	399aa	ENSP00000425416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512499.1	ADH4-011	946	257aa	ENSP00000423571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504125.1	ADH4-006	665	206aa	ENSP00000427525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506705.1	ADH4-004	1340	36aa	ENSP00000426667.1	Nonsense mediated decay		D6RF43	-	-
ENST00000509471.1	ADH4-009	575	115aa	ENSP00000424583.1	Nonsense mediated decay		H0Y9N0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504894.1	ADH4-003	489	36aa	ENSP00000427261.1	Nonsense mediated decay		D6RF43	-	-
ENST00000504581.1	ADH4-010	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503944.1	ADH4-007	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503416.1	ADH4-008	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 489 bps, Translation length: 36 residues

Version

ENST00000504894.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs3919370, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364501 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000504894.1 ADH4-003

Summary