Transcript: ENST00000505590.1 ADH4-005

Description

alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:252]

Gene Synonyms

ADH-2

Location

Chromosome 4: 100,045,530-100,065,427 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 7979 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000198099.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508393.1	ADH4-002	2151	399aa	ENSP00000424630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265512.7	ADH4-001	1993	380aa	ENSP00000265512.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34032	P08319	NM_000670.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423445.1	ADH4-201	1961	399aa	ENSP00000397939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505590.1	ADH4-005	1400	399aa	ENSP00000425416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8 P08319	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512499.1	ADH4-011	946	257aa	ENSP00000423571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504125.1	ADH4-006	665	206aa	ENSP00000427525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506705.1	ADH4-004	1340	36aa	ENSP00000426667.1	Nonsense mediated decay		D6RF43	-	-
ENST00000509471.1	ADH4-009	575	115aa	ENSP00000424583.1	Nonsense mediated decay		H0Y9N0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504894.1	ADH4-003	489	36aa	ENSP00000427261.1	Nonsense mediated decay		D6RF43	-	-
ENST00000504581.1	ADH4-010	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503944.1	ADH4-007	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503416.1	ADH4-008	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,400 bps, Translation length: 399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08319

Version

ENST00000505590.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs3919370, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364503 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000505590.1 ADH4-005

Summary