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Human (GRCh37.p13)
Description

serine hydroxymethyltransferase 1 (soluble) [Source:HGNC Symbol;Acc:10850]

Gene Synonyms

CSHMT, MGC15229, MGC24556, SHMT, hsa-mir-6778

Location
About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 17323 variant alleles and maps to 589 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000316694.3SHMT1-0012464483aaENSP00000318868.3
 
Protein coding
CCDS11196B4DPM9 J3KRZ5 P34896
Q9UMC9
NM_004169.3Ensembl CanonicalGENCODE basic
ENST00000352886.6SHMT1-2012136403aaENSP00000345881.6
 
Protein coding
J3KRZ5 P34896 Q9UMC9
-GENCODE basic
ENST00000539052.1SHMT1-2021759345aaENSP00000440089.1
 
Protein coding
CCDS62112B4DPM9 Q9UMC9 NM_001281786.1GENCODE basic
ENST00000354098.3SHMT1-0031656444aaENSP00000318805.3
 
Protein coding
CCDS11197J3KRZ5 P34896 Q9UMC9
NM_148918.1GENCODE basic
ENST00000582653.1SHMT1-009879167aaENSP00000462227.1
 
Protein coding
J3KRZ5 -CDS 3' incomplete
ENST00000583780.1SHMT1-0073321aaENSP00000462041.1
 
Protein coding
--CDS 3' incomplete
ENST00000580002.1SHMT1-0061759128aaENSP00000462043.1
 
Nonsense mediated decay
J3KRK5 --
ENST00000582352.1SHMT1-0102756No protein-
 
Retained intron
---
ENST00000395684.1SHMT1-0042652No protein-
 
Retained intron
---
ENST00000579558.1SHMT1-0081077No protein-
 
Retained intron
---
ENST00000395682.3SHMT1-005570No protein-
 
Retained intron
---
Statistics

Exons: 11, Coding exons: 3, Transcript length: 1,759 bps, Translation length: 128 residues

Version

ENST00000580002.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000446318 (version 1)