Transcript: ENST00000534112.1 SSH3-003

Description

slingshot protein phosphatase 3 [Source:HGNC Symbol;Acc:30581]

Gene Synonyms

FLJ10928, FLJ20515, SSH3L

Location

Chromosome 11: 67,071,180-67,072,340 forward strand.

About this transcript

This transcript has 2 exons, is associated with 666 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000172830.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308127.4	SSH3-001	2871	659aa	ENSP00000312081.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8157	Q8TE77	NM_017857.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376757.5	SSH3-008	2587	471aa	ENSP00000365948.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TE77	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308298.7	SSH3-011	2046	394aa	ENSP00000310055.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527821.1	SSH3-004	656	207aa	ENSP00000433902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532881.1	SSH3-002	2990	24aa	ENSP00000431788.1	Nonsense mediated decay		E9PJJ6	-	-
ENST00000532600.1	SSH3-010	555	41aa	ENSP00000432974.1	Nonsense mediated decay		E9PMS1	-	-
ENST00000532181.1	SSH3-006	948	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529224.1	SSH3-009	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531495.1	SSH3-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534112.1	SSH3-003	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525913.1	SSH3-007	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 544 bps,

Version

ENST00000534112.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393172 (version 1)

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Transcript: ENST00000534112.1 SSH3-003

Summary