Transcript: ENST00000405148.2 ALS2CR12-201

Description

amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 [Source:HGNC Symbol;Acc:14439]

Location

Chromosome 2: 202,153,147-202,222,101 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 9 domains and features, is associated with 27465 variant alleles and maps to 580 oligo probes.

Gene

This transcript is a product of gene ENSG00000155749.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405148.2	ALS2CR12-201	2013	445aa	ENSP00000385098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	NM_139163.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392257.3	ALS2CR12-002	1943	422aa	ENSP00000376086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	NM_001127391.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286190.5	ALS2CR12-001	1769	445aa	ENSP00000286190.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2346	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439709.1	ALS2CR12-004	1626	422aa	ENSP00000412073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46488	C9JTY0 Q96Q35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415745.1	ALS2CR12-008	782	124aa	ENSP00000402327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418364.1	ALS2CR12-009	458	49aa	ENSP00000407585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425488.1	ALS2CR12-005	430	143aa	ENSP00000393945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448967.1	ALS2CR12-006	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494171.1	ALS2CR12-003	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494223.1	ALS2CR12-007	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,013 bps, Translation length: 445 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96Q35

CCDS

This transcript is a member of the Human CCDS set: CCDS2346

Version

ENST00000405148.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000405148.2 ALS2CR12-201

Summary