Transcript: ENST00000519082.1 TCEB1-009

Description

transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:HGNC Symbol;Acc:11617]

Gene Synonyms

SIII, eloC

Location

Chromosome 8: 74,858,935-74,884,487 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 12105 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000154582.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000518127.1	TCEB1-004	1943	112aa	ENSP00000428334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204862.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602840.1	TCEB1-005	2780	65aa	ENSP00000473408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520242.1	TCEB1-001	1573	112aa	ENSP00000428171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_005648.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520210.1	TCEB1-003	1451	96aa	ENSP00000430224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56539	Q15369	NM_001204864.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522337.1	TCEB1-010	816	112aa	ENSP00000429906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519487.1	TCEB1-006	814	112aa	ENSP00000429596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523815.1	TCEB1-008	719	112aa	ENSP00000428074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	NM_001204861.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284811.8	TCEB1-007	683	112aa	ENSP00000284811.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34910	E5RHG8 Q15369	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519082.1	TCEB1-009	634	89aa	ENSP00000429789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 634 bps, Translation length: 89 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000519082.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379022 (version 1)

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Transcript: ENST00000519082.1 TCEB1-009

Summary