Transcript: ENST00000510324.1 CASP6-006

Description

caspase 6, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1507]

Gene Synonyms

MCH2

Location

Chromosome 4: 110,610,419-110,615,857 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2463 variant alleles and maps to 354 oligo probes.

Gene

This transcript is a product of gene ENSG00000138794.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265164.2	CASP6-001	1548	293aa	ENSP00000265164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3684	D6RHU3 P55212	NM_001226.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352981.3	CASP6-002	1340	204aa	ENSP00000285333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3685	P55212	NM_032992.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503684.1	CASP6-004	587	143aa	ENSP00000427669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHU3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505486.1	CASP6-003	538	80aa	ENSP00000424080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510324.1	CASP6-006	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507550.1	CASP6-009	892	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505117.1	CASP6-008	774	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508203.1	CASP6-007	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 643 bps,

Version

ENST00000510324.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363781 (version 1)

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Transcript: ENST00000510324.1 CASP6-006

Summary