Transcript: ENST00000526090.1 TMPRSS13-001

Description

transmembrane protease, serine 13 [Source:HGNC Symbol;Acc:29808]

Gene Synonyms

MSP, MSPL, MSPS, TMPRSS11

Location

Chromosome 11: 117,778,169-117,800,174 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 10136 variant alleles and maps to 311 oligo probes.

Gene

This transcript is a product of gene ENSG00000137747.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000524993.1	TMPRSS13-002	1950	567aa	ENSP00000434279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41721	E9PRA0 Q1RMF8	NM_001077263.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528626.1	TMPRSS13-003	3269	532aa	ENSP00000435813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55788	E9PIJ5	NM_001206789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526090.1	TMPRSS13-001	2592	491aa	ENSP00000436502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55789	Q9BYE2	NM_001206790.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445164.2	TMPRSS13-004	2361	586aa	ENSP00000394114.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430170.2	TMPRSS13-006	2175	563aa	ENSP00000387702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58185	F8WAJ3	NM_001244995.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528135.1	TMPRSS13-005	578	40aa	ENSP00000436025.1	Nonsense mediated decay		E9PR79	-	-
ENST00000525794.1	TMPRSS13-008	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,592 bps, Translation length: 491 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYE2

CCDS

This transcript is a member of the Human CCDS set: CCDS55789

Version

ENST00000526090.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392320 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000526090.1 TMPRSS13-001

Summary