Transcript: ENST00000524993.1 TMPRSS13-002

Description

transmembrane protease, serine 13 [Source:HGNC Symbol;Acc:29808]

Gene Synonyms

MSP, MSPL, MSPS, TMPRSS11

Location

Chromosome 11: 117,772,766-117,800,080 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 26 domains and features, is associated with 12695 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000137747.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000528626.1	TMPRSS13-003	3269	532aa	ENSP00000435813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55788	E9PIJ5	NM_001206789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526090.1	TMPRSS13-001	2592	491aa	ENSP00000436502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55789	Q9BYE2	NM_001206790.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445164.2	TMPRSS13-004	2361	586aa	ENSP00000394114.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430170.2	TMPRSS13-006	2175	563aa	ENSP00000387702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58185	F8WAJ3	NM_001244995.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524993.1	TMPRSS13-002	1950	567aa	ENSP00000434279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41721	E9PRA0 Q1RMF8	NM_001077263.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528135.1	TMPRSS13-005	578	40aa	ENSP00000436025.1	Nonsense mediated decay		E9PR79	-	-
ENST00000525794.1	TMPRSS13-008	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,950 bps, Translation length: 567 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41721

Version

ENST00000524993.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000392317 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000524993.1 TMPRSS13-002

Summary