Transcript: ENST00000528135.1 TMPRSS13-005

Description

transmembrane protease, serine 13 [Source:HGNC Symbol;Acc:29808]

Gene Synonyms

MSP, MSPL, MSPS, TMPRSS11

Location

Chromosome 11: 117,781,285-117,800,145 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 8624 variant alleles and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000137747.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000528626.1	TMPRSS13-003	3269	532aa	ENSP00000435813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55788	E9PIJ5	NM_001206789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526090.1	TMPRSS13-001	2592	491aa	ENSP00000436502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55789	Q9BYE2	NM_001206790.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445164.2	TMPRSS13-004	2361	586aa	ENSP00000394114.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430170.2	TMPRSS13-006	2175	563aa	ENSP00000387702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58185	F8WAJ3	NM_001244995.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524993.1	TMPRSS13-002	1950	567aa	ENSP00000434279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41721	E9PRA0 Q1RMF8	NM_001077263.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528135.1	TMPRSS13-005	578	40aa	ENSP00000436025.1	Nonsense mediated decay		E9PR79	-	-
ENST00000525794.1	TMPRSS13-008	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 578 bps, Translation length: 40 residues

Version

ENST00000528135.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392321 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000528135.1 TMPRSS13-005

Summary