Transcript: ENST00000492751.1 EDEM1-006

Description

ER degradation enhancer, mannosidase alpha-like 1 [Source:HGNC Symbol;Acc:18967]

Gene Synonyms

EDEM, KIAA0212

Location

Chromosome 3: 5,236,791-5,243,464 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3283 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSG00000134109.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256497.4	EDEM1-001	6146	657aa	ENSP00000256497.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33686	Q92611	NM_014674.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445686.1	EDEM1-003	1363	376aa	ENSP00000394099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DXP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434243.1	EDEM1-004	978	78aa	ENSP00000393659.1	Nonsense mediated decay		F8WER9	-	-
ENST00000443790.1	EDEM1-007	730	53aa	ENSP00000394615.1	Nonsense mediated decay		F8WE67	-	-
ENST00000465369.1	EDEM1-002	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465187.1	EDEM1-005	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492751.1	EDEM1-006	307	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 307 bps,

Version

ENST00000492751.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337589 (version 1)

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Transcript: ENST00000492751.1 EDEM1-006

Summary