Transcript: ENST00000518906.1 GFPT2-005

Description

glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242]

Gene Synonyms

GFAT2

Location

Chromosome 5: 179,745,809-179,758,648 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 5898 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000131459.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253778.8	GFPT2-001	3093	682aa	ENSP00000253778.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43411	B3KM63 O94808	NM_005110.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518906.1	GFPT2-005	697	216aa	ENSP00000431125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503228.1	GFPT2-002	557	178aa	ENSP00000422771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520165.1	GFPT2-008	657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518185.1	GFPT2-007	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503546.1	GFPT2-003	943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518158.1	GFPT2-006	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510122.1	GFPT2-004	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 697 bps, Translation length: 216 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000518906.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373909 (version 1)

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Transcript: ENST00000518906.1 GFPT2-005

Summary